PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0041ss00690.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 189aa    MW: 21508.6 Da    PI: 10.2113
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0041ss00690.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.28.6e-135896244
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAak 44
                       +y+GVr+ + +g+++AeIrdp+++g   r++lg+f+   +A+ 
  Vang0041ss00690.1 58 HYRGVRQQP-WGKFAAEIRDPNKRG--SRVWLGTFDI-AKAYN 96
                       8********.**********96655..**********.66654 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.107.5E-2457113IPR001471AP2/ERF domain
CDDcd000183.19E-2457112No hitNo description
PROSITE profilePS5103217.02958112IPR001471AP2/ERF domain
SuperFamilySSF541711.83E-1558114IPR016177DNA-binding domain
PfamPF008471.2E-75895IPR001471AP2/ERF domain
SMARTSM003802.9E-2658118IPR001471AP2/ERF domain
PRINTSPR003676.8E-105970IPR001471AP2/ERF domain
PRINTSPR003676.8E-1094114IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
LLHKKPQLNR KPSLQISLPR RSSGSNLGNP KKIEWIQFGK QVPNPPVVLL ENQSENKHYR  60
GVRQQPWGKF AAEIRDPNKR GSRVWLGTFD IAKAYNRVAF RLCGSKAILN FPLEASAVEE  120
VAEAEGEKKQ RREEEEVEEV KLVVKKEKKK QEVNCFREFS EVPKVANFQS YVKELASLLS  180
GADGHHEH*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-2754119170ATERF1
3gcc_A8e-2754119170ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150350.0AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014507066.12e-61PREDICTED: ethylene-responsive transcription factor 5-like
SwissprotO803417e-42EF102_ARATH; Ethylene-responsive transcription factor 5
TrEMBLA0A0L9TQV82e-62A0A0L9TQV8_PHAAN; Uncharacterized protein
TrEMBLA0A0S3R5G22e-62A0A0S3R5G2_PHAAN; Uncharacterized protein
STRINGGLYMA17G15460.12e-49(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108534109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.12e-37ethylene responsive element binding factor 5